Dr. Martin Stöckl

Publications

  • Schmalz, M., Liang, X., Wieser, I., Gruschel, C., Muskalla, L., Stöckl, M.T., Nitschke R., Linz, N., Leitenstorfer, A., Vogel, A., Ferrando-May, E. "Dissection of DNA damage and repair pathways in live cells by femtosecond laser microirradiation and free-electron modeling" PNAS 120, 25 (2023) e22201321, dx.doi.org/10.1073/pnas.2220132120

  •  Nelson, G., et al. "QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy" Journal of microscopy 284, 1 (2021) 56-73, dx.doi.org/10.1111/jmi.13041

  •  Dietzel, S., et al. "A Joint Action in Times of Pandemic: The German BioImaging Recommendations for Operating Imaging Core Facilities During the SARS-Cov-2 Emergency" Cytometry. Part A 97,9 (2020), 882-886 dx.doi.org/10.1002/cyto.a.24178

  • Theiss, S., Voggel, M., Schlötter, M., Sutter, S., Stöckl, M.T., and S. Polarz. "Tolerance in superstructures formed from high-quality colloidal ZnO nanoparticles with hexagonal cross-section." CrystEngComm 21 (2019), 5137-5144 dx.doi.org/10.1039/C9CE00811J
  • Abbandonato, G., Storti, B., Tonazzini, I., Stoeckl, M., Subramaniam, V., Montis, C., Nifosi, R., Cecchini, M., Signore, G., and R. Bizzarri. "

    Lipid-Conjugated Rigidochromic Probe Discloses Membrane Alteration in Model Cells of Krabbe Disease" Biophysical Journal 116, 3 (2019), 477-486, dx.doi.org/10.1016/j.bpj.2018.11.3141

  • Fischbach, A., A.Krüger, S. Hampp, G. Assmann, L. Rank, M. Hufnagel, M. T. Stöckl, J. M. F. Fischer, S. Veith, P. Rossatti, M. Ganz, E. Ferrando-May, A. Hartwig, K. Hauser, L. Wiesmüller, A. Bürkle, and A. Mangerich. "The C-Terminal Domain of P53 Orchestrates the Interplay between Non-Covalent and Covalent Poly(Adp-Ribosyl)Ation of P53 by Parp1." Nucleic Acids Res 46, no. 2 (Jan 25 2018): 804-22. dx.doi.org/10.1093/nar/gkx1205.

  •  Scheck, J., M. Drechsler, X. Ma, M. T. Stöckl, J. Konsek, J. B. Schwaderer, S. M. Stadler, J. J. De Yoreo, and D. Gebauer. "Polyaspartic Acid Facilitates Oxolation within Iron(Iii) Oxide Pre-Nucleation Clusters and Drives the Formation of Organic-Inorganic Composites." The Journal of Chemical Physics 145, no. 21 (2016): 211917. dx.doi.org/doi:http://dx.doi.org/10.1063/1.4963738.

  • Stefanovic, A. N., M. T. Stöckl, M. M. Claessens, and V. Subramaniam. "Alpha-Synuclein Oligomers Distinctively Permeabilize Complex Model Membranes." FEBS J 281, no. 12 (Jun 2014): 2838-50. dx.doi.org/10.1111/febs.12824. 
  • Sweers, Kim K. M., Martin Stöckl, Martin L. Bennink, and Vinod Subramaniam. "Chapter 29 - Characterizing Nanoscale Morphologic and Mechanical Properties of Α-Synuclein Amyloid Fibrils with Atomic Force Microscopy." In Bio-Nanoimaging, edited by Vladimir N. Uversky and Yuri L. Lyubchenko, 309-22. Boston: Academic Press, 2014.

  • Ferrando-May, E., M. Tomas, P. Blumhardt, M. Stöckl, M. Fuchs, and A. Leitenstorfer. "Highlighting the DNA Damage Response with Ultrashort Laser Pulses in the near Infrared and Kinetic Modeling." Front Genet 4 (2013): 135. dx.doi.org/10.3389/fgene.2013.00135.
  • Signore, G., G. Abbandonato, B. Storti, M. Stöckl, V. Subramaniam, and R. Bizzarri. "Imaging the Static Dielectric Constant in Vitro and in Living Cells by a Bioconjugable Gfp Chromophore Analog." Chemical Communications 49, no. 17 (2013): 1723-25. dx.doi.org/10.1039/C3CC38071H. 
  • Stöckl, M. T., R. Bizzarri, and V. Subramaniam. "Studying Membrane Properties Using Fluorescence Lifetime Imaging Microscopy (Flim)." In Fluorescent Methods to Study Biological Membranes, edited by Yves Mély and Guy Duportail, vol 13, Springer Series on Fluorescence, 215-40: Springer Berlin Heidelberg, 2013.
  • Wietek, J., I. Haralampiev, A. Amoussouvi, A. Herrmann, and M. Stöckl. "Membrane Bound Alpha-Synuclein Is Fully Embedded in the Lipid Bilayer While Segments with Higher Flexibility Remain." FEBS Lett 587, no. 16 (Aug 19 2013): 2572-7. dx.doi.org/10.1016/j.febslet.2013.06.034.

  • Bastos, AEP, S Scolari, M Stöckl, and RFM de Almeida. "Chapter Three - Applications of Fluorescence Lifetime Spectroscopy and Imaging to Lipid Domains in Vivo." In Methods in Enzymology, edited by P. Michael conn, vol Volume 504, 57-81: Academic Press, 2012.
  • Stöckl, M., M. M. A. E. Claessens, and V. Subramaniam. "Kinetic Measurements Give New Insights into Lipid Membrane Permeabilization by [Small Alpha]-Synuclein Oligomers." Molecular BioSystems 8, no. 1 (2012): 338-45. dx.doi.org/10.1039/C1MB05293D.
  • Stöckl, M. T., N. Zijlstra, and V. Subramaniam. "Α-Synuclein Oligomers: An Amyloid Pore?" Molecular Neurobiology  (2012/09/01 2012): 1-9. dx.doi.org/10.1007/s12035-012-8331-4.

  •  Stöckl, M., B. D. van Rooijen, M. M. A. E. Claessens, and V. Subramaniam. "Structural and Functional Insights into Α-Synuclein–Lipid Interactions." In Lipids and Cellular Membranes in Amyloid Diseases, 33-55: Wiley-VCH Verlag GmbH & Co. KGaA, 2011.

  • Finkenwirth, F., O. Neubauer, J. Gunzenhäuser, J. Schoknecht, S. Scolari, M. Stöckl, T. Korte, A. Herrmann, and T. Eitinger. "Subunit Composition of an Energy-Coupling-Factor-Type Biotin Transporter Analysed in Living Bacteria." Biochemical Journal 431, no. 3 (Oct 11, 2010 2010): 373-80. dx.doi.org/10.1042/bj20100813.
  • Nikolaus, J., S. Scolari, E. Bayraktarov, N. Jungnick, S. Engel, A. Pia Plazzo, M. Stöckl, R. Volkmer, M. Veit, and A. Herrmann. "Hemagglutinin of Influenza Virus Partitions into the Nonraft Domain of Model Membranes." Biophys J 99, no. 2 (Jul 21 2010): 489-98. dx.doi.org/10.1016/j.bpj.2010.04.027.
  • Nikolaus, J., M. Stöckl, D. Langosch, R. Volkmer, and A. Herrmann. "Direct Visualization of Large and Protein-Free Hemifusion Diaphragms." Biophys J 98, no. 7 (Apr 7 2010): 1192-9. dx.doi.org/10.1016/j.bpj.2009.11.042.
  • Stöckl, M., J. Nikolaus, and A. Herrmann. "Visualization of Lipid Domain-Specific Protein Sorting in Giant Unilamellar Vesicles." Methods Mol Biol 606 (2010): 115-26. dx.doi.org/10.1007/978-1-60761-447-0_10.
  • Stöckl, M. T. and A. Herrmann. "Detection of Lipid Domains in Model and Cell Membranes by Fluorescence Lifetime Imaging Microscopy." Biochim Biophys Acta 1798, no. 7 (Jul 2010): 1444-56. dx.doi.org/10.1016/j.bbamem.2009.12.015.

  •  Zarubica, A., A. P. Plazzo, M. Stöckl, T. Trombik, Y. Hamon, P. Müller, T. Pomorski, A. Herrmann, and G. Chimini. "Functional Implications of the Influence of Abca1 on Lipid Microenvironment at the Plasma Membrane: A Biophysical Study." FASEB J 23, no. 6 (Jun 2009): 1775-85. dx.doi.org/10.1096/fj.08-122192.

  • Bunge, A., P. Müller, M. Stöckl, A. Herrmann, and D. Huster. "Characterization of the Ternary Mixture of Sphingomyelin, Popc, and Cholesterol: Support for an Inhomogeneous Lipid Distribution at High Temperatures." Biophys J 94, no. 7 (Apr 1 2008): 2680-90. dx.doi.org/10.1529/biophysj.107.112904.
  • Stöckl, M., P. Fischer, E. Wanker, and A. Herrmann. "Alpha-Synuclein Selectively Binds to Anionic Phospholipids Embedded in Liquid-Disordered Domains." J Mol Biol 375, no. 5 (Feb 1 2008): 1394-404. dx.doi.org/10.1016/j.jmb.2007.11.051.
  • Stöckl, M., A. P. Plazzo, T. Korte, and A. Herrmann. "Detection of Lipid Domains in Model and Cell Membranes by Fluorescence Lifetime Imaging Microscopy of Fluorescent Lipid Analogues." J Biol Chem 283, no. 45 (Nov 7 2008): 30828-37. dx.doi.org/10.1074/jbc.M801418200.
  • Tünnemann, G., G. Ter-Avetisyan, R. M. Martin, M. Stöckl, A. Herrmann, and M. C. Cardoso. "Live-Cell Analysis of Cell Penetration Ability and Toxicity of Oligo-Arginines." J Pept Sci 14, no. 4 (Apr 2008): 469-76. dx.doi.org/10.1002/psc.968.

  • Papadopulos, A., S. Vehring, I. Lopez-Montero, L. Kutschenko, M. Stöckl, P. F. Devaux, M. Kozlov, T. Pomorski, and A. Herrmann. "Flippase Activity Detected with Unlabeled Lipids by Shape Changes of Giant Unilamellar Vesicles." J Biol Chem 282, no. 21 (May 25 2007): 15559-68. dx.doi.org/10.1074/jbc.M604740200.